TypeIVB-06


Sequence Alignment Alignment made by Cao
VirB6_Atu1      ------------------------------------------------------------
VirB6_Atu2      ------------------------------------------------------------
VirB6_Bsu       ------------------------------------------------------------
VirB6_Bab       ------------------------------------------------------------
TrbL_Atu1       ------------------------------------------------------------
TrbL_Atu2       ------------------------------------------------------------
TrbL_Rsp        ------------------------------------------------------------
TrbL_Eae        ------------------------------------------------------------
TrwI_Eco        ------------------------------------------------------------
Orf_Xfa         ------------------------------------------------------------
TraD_Eco        ------------------------------------------------------------
VirB6_Bhe       ------------------------------------------------------------
LvhB6_Lpn       ------------------------------------------------------------
PtlD_Bpe        MAGLSRILLSCTLACLLAGQAAQASVDDPTRAGGDNRVRALRADQARRDVLLTACRDDPG
                                                                            

VirB6_Atu1      -----------------------MNFTIPAPFTAIHTIFDVAFTTGLDSMLETIQEAVSA
VirB6_Atu2      -----------------------MNFTIPAPFTAIHTIFDLAFTTSLDTMLGTIQEAVSA
VirB6_Bsu       -------------------------MVNPVIFEFIGTSIHNQLNNYVTMVASNTMNMIAT
VirB6_Bab       -------------------------MVNPVIFEFIGTSIHNQLNNYVTMVASNTMNMIAT
TrbL_Atu1       ---------------------MVVHPSPKLELAFVTIGFVLLASSPALAQQGQVLTTLEN
TrbL_Atu2       --------------------MVVVRPSRRLEMTFIVMAIVLLATAPAFAQQGTVLTTLEN
TrbL_Rsp        ----------------------MVKISLARSLLIAGLAYVAFEAR-AFAQEGLVLTELEN
TrbL_Eae        -------------------MRMPANLKTLALPLFVWLAFFAVDAHAAIDNAG-VFDSVLD
TrwI_Eco        --------------------------MAFELFTPLFNKIDQTTATYVTDISSRAIAAITP
Orf_Xfa         --------------------MGASVASNFHFYSRMFTELSNALNTYVNDTAANIIGAITP
TraD_Eco        --------------------------MAFTLVQDIFAKVDGAITSMVSANVATIISDVTP
VirB6_Bhe       -----------------------MSDFSFSPFESISGYILQPLNNVMNTTVSGLSSAISA
LvhB6_Lpn       ----------------------MSTLQFDNFIIQLAGEIDKLTNHFVFDGYTALASLLKA
PtlD_Bpe        HRRGEPDCVNAERAQALQQWQAAAMTSVDAAFSDLAGALRNAAPRRMEAAIVRLTRQLQP
                                                                         :  

VirB6_Atu1      PLIACVTLWIIVQG-------ILVIRGEVDT--RSGITRVITVTIVVALIVGQANYQDYV
VirB6_Atu2      PLVACVTLWIIVQG-------ILVMRGEIDT--RGGITRVITVTVVVALVVGQANYHDYV
VirB6_Bsu       TAVLAGGLYYTAMG-------ILMSVGRIEGPFSQLVISCIKFMLIAAFALNISTYSEWV
VirB6_Bab       TAVLAGGLYYTAMG-------ILMSVGRIEGPFSQLVISCIKFMLIAAFALNISTYSEWV
TrbL_Atu1       SVVTAAKGWETTVMNAARSLFWILAGIEVGIAAVWLAINAASLDSWFAELVKRIMFIGLF
TrbL_Atu2       QVVTAAKGWETTILNAARSLFWILAGIEIGIAAVWLAINAASLDAWFAELVRRIMFIGLF
TrbL_Rsp        HVSAAAKGWETTILDAAKSLFWILATIEIGIAAVWLALQAASLDSWFAELVRRIMFVGFF
TrbL_Eae        RYQTAASGWAGVITTAATWLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFF
TrwI_Eco        VVSVGLTLGFITYG-------WLIIRGAVEMPVAEFLNRCLRIGIIVSIALAGGLYQGEI
Orf_Xfa         VATTLLTIYVILWG-------WSMMRGVISEPITDGVGRIVRLAVICGIALKIGYYNGFI
TraD_Eco        LVATCLTIKLMMQG------LYSMFNPGAGDSLSSLIKEYLSIALILSFATAGGWFQQDL
VirB6_Bhe       PLNLASIIFIFLYG-------YNVMTGRVALSMNSLLNNVVKIVIVTTMATNADTFNTYV
LvhB6_Lpn       PLGAMIVLYIILKG-------YGIALGVIERPQQELFRFSMRAGLIYMMAMNWDLFSSYM
PtlD_Bpe        LVYSMMTLLVLLTG--------YALLARRDRPFEWHIRHALLVAVVTSLALSPDRYLSTV
                                                                       :   .

VirB6_Atu1      VSIFEKTVPIFVQQFSV-TGLPLQTV----PAQLDTIFAV---TQAVFQKIASEIGPMND
VirB6_Atu2      VSVFEETIPNFIQQFSG-SGLPLQTI----PAQLDTMFAL---TQAAFQRIASEIGPMND
VirB6_Bsu       IDTVHNMESGFADAFAGNHGTPSSTI----YQTLDNSLGKGWNIAAMLFEKGDNRGLTQI
VirB6_Bab       IDTVHNMESGFADAFAGNHGTPSSTI----YQTLDNSLGKGWNIAAMLFEKGDNRGLTQI
TrbL_Atu1       AFILDRGLEFAKAVVDSLYQIGAGGG----SASPANIFDAG-IRVATKMSEQAKFGLWED
TrbL_Atu2       AFILERGPALAKAVVDSLFQIGAGGG----SASPANIFDAG-IRVASKMSEQAKFGLFED
TrbL_Rsp        AFVLTQGPTFARAVIDSLFQIGAGGG----SASPAEIFDAG-IRVASQMSQQAQFGVFED
TrbL_Eae        WWALTNGPNFASSIYASLRQLAGNATGLGNALSPSGIVDVGFAIFDKVMDQSSVWSPVDS
TrwI_Eco        ANAITTVPDELASALLGNPTEGASAA-----ALVDQSAQQGFDRASEAFEEAGFFSSDGL
Orf_Xfa         SDFLWNAPDEMANYLGGRDGESNAAF-------LDTLMSKMYDFGDTYYQKAQANTTLGV
TraD_Eco        VNVALHMPDDFAGILSSPDKVEASGVP----AIIDSGIEKGVRIVNTAWDAADVFSSSGL
VirB6_Bhe       KNIFFG---DLANAIGNALNSNPSSAN-----VFDYILLKTSARYQEVLAAAWFLEKIMV
LvhB6_Lpn       RDLFVSGSESIATQLMQAVQKNPSSG------SINQGLQN---VLNEILKLGSDLFEAGS
PtlD_Bpe        VAGVQDVAGWLSGPWTAPDGAAGRGG----LAQLDQFAAQAQAWVAQLAGQAANDANPGS
                                                                            

VirB6_Atu1      QDILAFQGAQWVLYGTLWSAFG----VYDAVGILTKVLLAIGPLILVGYIFDRTRDIAAK
VirB6_Atu2      QDILAFQGAQWVFYGTLWSAFG----IYDAVGILTKVLLAIGPLILTGYIFDRTRDIAAK
VirB6_Bsu       VQGFSELLLSFLVAGSTLILAGPTGAMIVATNAVIAILLGIGPLFILALGWAPTRGFFDR
VirB6_Bab       VQGFSELLLSFLVAGSTLILAGPTGAMIVATNAVIAILLGIGPLFILALGWAPTRGFFDR
TrbL_Atu1       NALAIAAVFAMVVVVVSFSLVA---AIFVAVMVEMYVGLLAGMIMLGLGGSSYTKDFAVK
TrbL_Atu2       NALAIAAVFAMVVVVVSFSLVA---AIFVAVMVEMYVGLLAGMIMLGLGGSSYTKDFAVR
TrbL_Rsp        NALAIAAVLAMGVVVICFSLVA---AIFVSVMVEMYVGLLAGMIMLGLGGSSFTKDFAVR
TrbL_Eae        ----MAGILMAVAILVILALVG---VNMLLLLASGWVLAYGGVFFLGFGGSRWTSDMAIN
TrwI_Eco        LYG-LFGIIIPAGYGPAGAIGG---AFLLLAKIALALLAGLGPLFILALIWQPTHRFFDQ
Orf_Xfa         PN-LGFLFMGYGIWAAGILATGYGAFLLALAKMGLAITLGIGPIFVLLIMFEPTKRFFDA
TraD_Eco        AAYAIGGIMLVATVVLGGLGAG----FVIMAKILLAVTLCFGPIAIFCLLWGLIKNIFAR
VirB6_Bhe       GLLGSLMIMAVIVFCIGGFIVQ------MFAQVALVMIIGLGPLFISLYLFNATRKFTDA
LvhB6_Lpn       LRKLTPYFAGMMVFLSGSVTIGLAFIEIVIAKLMLAVTLCTTPLFILFTLFDQTKSFFDR
PtlD_Bpe        AVNWLLCAMIVAASAGGWLCLAAS--LLIVPGLIVTLLLSLGPLFLVLLLFPALQRWTNA
                                                    :      : :              

VirB6_Atu1      WIGQLITYGLLLLLLN--------------LVATIVILTEAT-------------ALTLM
VirB6_Atu2      WIGQLITYGLLLLLLN--------------LVATIVILTEAT-------------ALTLM
VirB6_Bsu       WFGAIVTSILQVALLSAVLSISSAIFS--RMVAAINLASATQSTLFS---CLSLTAVTIV
VirB6_Bab       WFGAIVTSILQVALLSAVLSISSAIFS--RMVAAINLASATQSTLFS---CLSLTAVTIV
TrbL_Atu1       YLVYAFSVGMKLMALVMIARIGSDILL--GLAEAPTATSEQFITTLA---IAGISVVVFV
TrbL_Atu2       YLVYAFSVGMKLMALVMIAKIGSDILI--GLAEAPTATSDQFITTLA---IAGISVVVFV
TrbL_Rsp        YLVYAFGVGMKLMALVMIAKIGSQVLL--GLANAPTASSDQFVTTLA---IAGISVVVFI
TrbL_Eae        YYKVVLGVAAQLFAMVLLVGIGKTFLD--DYYSRMSAGISLKEMG-V---MLIVVIILLA
TrwI_Eco        WAQQVLNYGLLIVLFAAVFGLLMQIFG--SYMADLRFDGAQNVAYAIGG-SVILSIVSIV
Orf_Xfa         WLGQTLNYVFLVMLTAAAIKLIMTILE-KYLTSAMGVDVDPSLDKALP--AIVFSIIGAL
TraD_Eco        WLGSVINYGLVVVVLALVFGFIMQMFD--NLLSSMNSDAAYSSITGSMA-ALLLTIISIF
VirB6_Bhe       WITTLVNFTILQVLVIMLGTIMCKIIL---YVLDGTYESIYFLFPP----VVVISIVGAI
LvhB6_Lpn       WLGVLAGFAFVLIFVSSVVGLCIHLLH---WVTYAFLGNTDELTAAI---WVPIFIVACL
PtlD_Bpe        WLGALVRALVFMALGTPAVGLLSDVLAG-ALPAGLPQRFATDPLRSTMLAATLCATATLM
                :                                                           

VirB6_Atu1      L--------------GVITFAGT-------TAAKIIGLYELDMFFLT-GDALIVALPAIA
VirB6_Atu2      L--------------GVITLAGT-------TAAKIIGLYELDMFFLT-GDALIVALPAIA
VirB6_Bsu       MPYMRNKVYEYG---GILGSSIS-------AATISLGSLAVNTATSG-GGAMTSIFSGSS
VirB6_Bab       MPYMMYKVYEYG---GILGSSIS-------AATISLGSLAVNTATSG-GGAMTSIFSGSS
TrbL_Atu1       IAMYVPPILQG----LVQGASVG-------GGMEAIRHGGQAASAAL-GAGFLTIGAANR
TrbL_Atu2       IAMYVPPIIQG----VVQGASVS-------GGMEAIRHGGQTAAFAA-GGAFLGAGAAMK
TrbL_Rsp        IAMYVPSIIQG----VVQGASVS-------GGMETIRHGGQAASFAA-GAGFLAGGAART
TrbL_Eae        LVNKIPPLIAG----IITGASVGGAGIGQFGAGAALGAAGMAAAAAATGGAALAAGAASA
TrwI_Eco        LLMQLPSIASG------LAGGIG------LGYMWELRSMRSGAGAAMRGGRAMARGARAA
Orf_Xfa         VMVQMPSKAS------ALGGGVA---------ISTLGAVAFAYGKAKGSMSAMRPTNLRR
TraD_Eco        VLFQIPQVAQS------WGSGIS----------AGVADAARSTGSSMQALGNMGSHGMFG
VirB6_Bhe       LFRALPG----------IASALS------------SGGPYFNAGISSGGQIFTMLSSGAK
LvhB6_Lpn       CVMGITQAVA-------IGKSIG-------GSVCTSAGSAMVGGFIGGGLGAWGFSKSSV
PtlD_Bpe        LLTLVPLASS-------VNAGLR------RRLWPNAAHPGLAQAHRQAAARQYAPRPAAA
                                    .                           .           

VirB6_Atu1      G-----------------------------------NIGG--------------------
VirB6_Atu2      G-----------------------------------NIGG--------------------
VirB6_Bsu       GG----------------------------GGSGSAKAGGE-------------------
VirB6_Bab       GG----------------------------GGSGSAKAGGE-------------------
TrbL_Atu1       GF----------------------------AAASAARAGGASLAGAAMRGLEAGVGGAAG
TrbL_Atu2       GA----------------------------QSASTARAEGSSMAGAALRGMASGIGNAGW
TrbL_Rsp        GF----------------------------TAGQSARAAGSSLAGAALRGFGAGIGSASS
TrbL_Eae        AGGASAVMAAFSKANENVSAGTDVMSAFSGGGSSGGGAGGGGDAGTGSTPFAQAAGFSGS
TrwI_Eco        PG-----------------------------AARGAAVGAAN------------------
Orf_Xfa         SFN---------------------------KARSDFRIARD-------------------
TraD_Eco        GN-----------------------------AFRGGNTGGG-------------------
VirB6_Bhe       TG------------------------------RNAAKSAAS-------------------
LvhB6_Lpn       QKP---------------------------INTLTQGLGG--------------------
PtlD_Bpe        AA-----------------------------AAGPHQAGTY-------------------
                                                                            

VirB6_Atu1      ----SYWSGATQSASSLYRR--------FAQVERG-------------------------
VirB6_Atu2      ----SYWSGATQSANSLYRR--------FAQVDRR-------------------------
VirB6_Bsu       ---SSYSAGGNAMWSPAYRQHV------LGQFNRD-------------------------
VirB6_Bab       ---SSYSAGGNAMWSPAYRQHV------LGQFNRD-------------------------
TrbL_Atu1       A-VGSAAKDKAIGSPGAYAGSM------LGLANAKLDQ--QSGRPGTPPPPPPINDKK--
TrbL_Atu2       A-AGSAAKEKAIASPGAYAGSL------LGLANAKLDQTRQSGRPSAPPPPPPVNENK--
TrbL_Rsp        A-AGSAAKEKAIGSPGAYAGSI------LGLANAKLDE--SRGGHSGHKPPPERKD----
TrbL_Eae        S-GGGSSSGGGSPSTGSSSGSSKGGDKGGGKADAGGQGSSSTASTGSSADKAAKNEPKPA
TrwI_Eco        --MAKTVATGGAGVARAAAG-------YFRGRKAG-------------------------
Orf_Xfa         --AVRSTAGMPLAVYRKVTGAN------KNRVARR-------------------------
TraD_Eco        ---QQSAGGGSGSNSGGSSGSN------LSGKARGSRGKKAA------------------
VirB6_Bhe       ---TLSGAAGTATKAAKIGG---------NGRGRF-------------------------
LvhB6_Lpn       --ASRLVEKGKQLGTASHN--------VFKQLHKNLRRGAS-------------------
PtlD_Bpe        --AASATPAPAPARPAPSFPAHAYRQYALGGARRPPPRVRRDDRPAPAPDRRVLPRKPNL
                                                                            

VirB6_Atu1      ------------------------------------------------------------
VirB6_Atu2      ------------------------------------------------------------
VirB6_Bsu       ------------------------------------------------------------
VirB6_Bab       ------------------------------------------------------------
TrbL_Atu1       ------------------------------------------------------------
TrbL_Atu2       ------------------------------------------------------------
TrbL_Rsp        ------------------------------------------------------------
TrbL_Eae        GGAGQGQQAAPGSTGPGLLASAASALGTAGRIAADAGANLAKGTADVAKAKAASLREAAA
TrwI_Eco        ------------------------------------------------------------
Orf_Xfa         ------------------------------------------------------------
TraD_Eco        ------------------------------------------------------------
VirB6_Bhe       ------------------------------------------------------------
LvhB6_Lpn       ------------------------------------------------------------
PtlD_Bpe        P-----------------------------------------------------------
                                                                            

VirB6_Atu1      ------------------------------------------------------------
VirB6_Atu2      ------------------------------------------------------------
VirB6_Bsu       ------------------------------------------------------------
VirB6_Bab       ------------------------------------------------------------
TrbL_Atu1       ------------------------------------------------------------
TrbL_Atu2       ------------------------------------------------------------
TrbL_Rsp        ------------------------------------------------------------
TrbL_Eae        ERIADTTGGKIAAAIKAQGSGTAENIDVPDQQPAPSFGDNRLAGGPADADPESEVAAFAN
TrwI_Eco        ------------------------------------------------------------
Orf_Xfa         ------------------------------------------------------------
TraD_Eco        ------------------------------------------------------------
VirB6_Bhe       ------------------------------------------------------------
LvhB6_Lpn       ------------------------------------------------------------
PtlD_Bpe        ------------------------------------------------------------
                                                                            

VirB6_Atu1      ----------
VirB6_Atu2      ----------
VirB6_Bsu       ----------
VirB6_Bab       ----------
TrbL_Atu1       ----------
TrbL_Atu2       ----------
TrbL_Rsp        ----------
TrbL_Eae        REQGRDGTTA
TrwI_Eco        ----------
Orf_Xfa         ----------
TraD_Eco        ----------
VirB6_Bhe       ----------
LvhB6_Lpn       ----------
PtlD_Bpe        ----------
                          
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