TypeIVB-05


Sequence Alignment Alignment made by Cao
VirB5_Atu1      ---------------------------------------MKTTQLIATVLTCSFLYIQPA
VirB5_Atu2      ---------------------------------------MKIMQLVAAAMAVSLLSVGPA
TrbJ_Atu        MPIHSSRPTRLARHAMIAAILLSSTSPMPAVAGGVTGQATEWTQLANNTELISLVGKSAE
TrbJ_Rsp        MPRRCSMSNNLLAGLAVVAVTVGTG--EPADAGTATGVATEWTQVLNNGELVALVGKSNE
VirB5_Bsu       ----------------------------MKKIILSFAFALTVTSTAHAQLPVTDAGSIAQ
VirB5_Bab       ----------------------------MKKIILSFAFALTVTSTAHAQLPVTDAGSIAQ
TraE_Eco1       ------------------------------------------------------MEHGAR
TraL_Sty        ------------------------------------------------------MEHGAR
TraE_Eco2       ------------------------------------------------------MEHGAR
TraE_Eco3       ------------------------------------------------------MEHGAR
TrwJ_Eco        -----------------------------MKKLVMTAAVAAILGAASPVMAQGIPVFDGT
TraC_Eco        ----------------------------MKKSLTAVLLTTGLILGGAQRPSAGIIVSNPT
LvnH5_Lpn       ------------------------MKRAACFLIAAMGISSASHADILGVEDAQLIVLAMK
TrbJ_Eae        ------------------MKPKFLAAKLALVIAVSSTLAVTPVQAGIPVIDGTNLSQNIM
                                                                            

VirB5_Atu1      RAQFVVSDPATEAETLATALATAENLTQTIAMVTMLTS---AYGVTG---LLTSLNQ-KN
VirB5_Atu2      RAQFVVSDPATEAETLATALETAANLEQTITMVAMLTS---AYGVTG---LLTSLNQ-KN
TrbJ_Atu        QVNNQITQISQLAEQIQNQLNIYRNMLQNTAQLPNHIWGQVENDLKN---LQNVVNE-GQ
TrbJ_Rsp        QIQNQLTQISQFAQQIETQLNIYQNLLQNTATLPSHMWGQVERDLNR---LRSIVDQ-GQ
VirB5_Bsu       NLANHLEQMVKFAQQIEQLKQQFEEQKMQFDALTGYRGLGDILRDPT---LRSYLPH-NW
VirB5_Bab       NLANHLEQMVKFAQQIEQLKQQFEQQKMQFDALTGNRGLGDILRDPT---LRSYLPH-NW
TraE_Eco1       LSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNE----QRTAV---TPMGFN---V
TraL_Sty        LSTSRVLAISFIFMALLIVLSLAVNVIQGINNYRLQNE----QRTAV---TPMGFN---A
TraE_Eco2       LSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNE----QRTAV---TPMRFN---A
TraE_Eco3       LSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNE----QRPAV---TPMGFN---V
TrwJ_Eco        RALDFVQQFARMKEQLDTAKDQLAEAQRMYEAVTGGRGLGDLMRNAQ---LREYLPD-DL
TraC_Eco        ELIKQGEQLEQMAQQLEQLKSQLETQKNMYESMAKTTNLGDLLGTSTNT-LANNLPD-NW
LvnH5_Lpn       QLGELKEQYRVLSDTYQTAKNQLDNLNQLKSMNSGHYGFGDFNNSLDSL-QSWQSPVSTW
TrbJ_Eae        TAIESVAQTLKQIEQYSTQLQQYQNQLQNTMAPAAYIWDQAQSTINGLMNAVNTLDYYKT
                                                                            

VirB5_Atu1      QYPSTKDLDNEMFSPRMPMSTTARAITSDTDRAVVGSDAEADLLRSQITGSANSAGIAA-
VirB5_Atu2      QYPSTRDLDTEMFSPRMPMSTTARAITTDTDRAVVGGDAEADLLRSQITGSANSAGIAA-
TrbJ_Atu        GVAFSMGNVEDVMKQRFQSFAEMKSNLPDGASFSTTYQNWSGTNRDTIAGTLKAANLTS-
TrbJ_Rsp        SIAFSMGNADHVLQQRFQSYATLKTNLPRNETFSSTYQAWSDTNRDTIASTLNAASLTA-
VirB5_Bsu       RDLYEAVMSGGYLAAAGETTNLLRKSQVYDPCASISDKDQRIACEAKVVKPVQDKVMTS-
VirB5_Bab       RDLYEAVMSGGYLAAAGETANLLRKSQVYDPCASISDKDQRIACEAKVVKPVQDKVMTS-
TraE_Eco1       PFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEE-
TraL_Sty        SFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRSGAQNQMKVILAEE-
TraE_Eco2       PFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEE-
TraE_Eco3       PFAVSQNSADASYLQQMALSFIALRLNVSPEIVDASHQALLQYIRPGAQNQMKVILAEE-
TrwJ_Eco        RTVYDSANGGGYSGISGSINDILRDERLNG---SVADMRRSIEERSRTARTTDKAVGCG-
TraC_Eco        KEVYSDAMNSSSSVTPSVNSMMGQFNAEVDD--MSPRQAIAYMKQKLDGKRCLRPCDGR-
LvnH5_Lpn       QDALQNLSGGNQQRYQALMDAYEKNHPALDENSYARFTTPANAARFKEDKAVNRAVMVQT
TrbJ_Eae        QLGSLDSYIGKFQDVNYYKNSPCFTAAGCSDAERAALRNVAQLASESQKKANDALFKGLD
                                                                            

VirB5_Atu1      -DNLETMDKRLTANADTSAQLSRSRNIMQATVTNGLLLKQIHDAMIQNVQATNLLTMATA
VirB5_Atu2      -DNLETMDKRLTANAETSTQLSRSRNIMQATVTNGLLLKQIHDAMIQNVQATSLLTMTTA
TrbJ_Atu        -EQFSSEES--TMSSLRSMSESSDGQMKALQVGHQIAAQQVAQMQKLRGLVSQQMTMMGT
TrbJ_Rsp        -DQFDSEET--TMSSLRSMSETADGQMKALQVGHEIAAQQVGQMQKLRGLVSQQMTMMGT
VirB5_Bsu       -KAYDATDKRLQEIESLMQEINKTGDPKAIAELQGRIESENAMIQNEDTRLHLYQQMAEA
VirB5_Bab       -KAYDATDKRLQEIESLMQEINKTGDPKAIAELQGRIESENAMIQNEDTRLRLYQQMAEA
TraE_Eco1       -AKRIKNDN---VNSAFFQTSVRVWPQYGRVEIHGVLKTWIGDSKPFTDIKHYILILKRE
TraL_Sty        -ARRIKADN---VNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE
TraE_Eco2       -AKRIKNDN---VNSAFFQTSVRVCLSMAVWKFRGVLKTWIGDSKPFTDIKHYILILKRE
TraE_Eco3       -AKLIKKDN---VNSAFFQTSVRVCLSMVVWKFRGIRKTWIGNSEPFTDIKHYILILKRE
TrwJ_Eco        -PTKGHSN----ASRRLKDEISRTQDQKAIEELQARIAGEQAAIQNETTKLQMIAQLRQA
TraC_Eco        -KAYNNQMQELSDMQALTEQIKSTPDLKSIADLQARIQTSQGAIQGEQATWNLMNMLQQS
LvnH5_Lpn       TESYNEINKHMEALHKLSQQIEKTPNTKGAIDLNSRLITEIGFIQLMSLRLQALISQQAA
TrbJ_Eae        RQQTNLTADAATLQRLQSAAQGAQGQMQAIGYANQLASQQANQLLQIRGLLIAQQNAMAT
                                                 .                          

VirB5_Atu1      QAGLHEAEEAAAQRKEHQKTAVIFGALP---------
VirB5_Atu2      QAGLHEAEEAAAQRKEHQKTAVIFGAVP---------
TrbJ_Atu        WYQSEQAQKDLAQARREQFFSGTEHDIRGGQTMEPRW
TrbJ_Rsp        WLQTEQTDKDLAQARREKFFNADVKSIPEGQKMEPRW
VirB5_Bsu       QDKLLDERQHELDAKDNARRGYPQPKALEAAY-----
VirB5_Bab       QDKLLDERQHELDAKDNARRGYPQPKALEAAY-----
TraE_Eco1       NGVTWLDNFGETDDEKK--------------------
TraL_Sty        NGVTWLDNFGETDDEKK--------------------
TraE_Eco2       NGVTWLDNFGETDDEKK--------------------
TraE_Eco3       NGVTWLDNFGETDDEKK--------------------
TrwJ_Eco        EQALISEQRRERNMPILSSGNQGMPTIQ---------
TraC_Eco        QDKLLRAQKDRATRNFVFGTGGDVTASPSIN------
LvnH5_Lpn       QENLSALQDRAEMAKFNRLPK----------------
TrbJ_Eae        KMQADADKEAQQAAAAAQLRQGSYRASPARTW-----
                                                     
Other Results