TypeIVB-03


Sequence Alignment Alignment made by Cao
VirB3_Atu1      ----------MNDRLEEATLYLAATRPALFLGVPLTLAGLFMMFAGFVIVIVQNPLYEVV
VirB3_Atu2      ----------MNDRLEEATLYLAATRPALFLGVPLTLAGLLVMFAGFVIVIVQNPLYEVV
VirB3_Bsu       MTTAPQESNARSAGYRGDPIFKGCTRPAMLFGVPVIPLVIVGGSIVLLSVWIS-MFILPL
VirB3_Bab       MTTAPQESNARSAGYRGDPIFKGCTRPAMLFGVPVIPLVIVGGSIVLLSVWIS-MFILPL
PtlD_Bpe        ---------------MRDPLFKGCTRPAMLMGVPATPLAVCSGTIALLGIWFS-IAFLAL
TrbD_Atu1       -------MAESGSALVRSRVHRALSRPNLLMGADRELVLLTALAAIILIFVVLTWYAALF
TrbD_Atu2       -------MAEPGSNLARSRVHRALSRPNLLMGADRELVLLTGLAAVILIFVVLTWYAALF
TrbD_Rsp        -------MAEALSERYRNRIHRALSRPNLLMGADRELVLITGLAAVILIFVVLTVYSALF
TrbD_Eae        ------------MALRAIPIRRAGNRENLFMGGDRELVMFSGLCGGALIFSAQEVRATVF
TraL_Eco        ------MMSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGITTSKYLFGIGA
TraL_Sty2       -------MSGDENKLRKYRFPETLTNQSRWFGLPVDELIPAAVCIGWGLMTSKQLFGISA
TraL_Sty1       ---------MEGNDLDKYRFPKTLSEQNRIIGLPLDEAIPAAVVLLWGFFTKKYLFSLII
TrwM_Eco        -------MKPPQQQHEAFPLFKGATRLPTILGEPMIPLMAMVMGVAVIALTVS-IWWWAL
TraA_Eco        -----------MFVDGKRPLFKGATRLPRALGVPRNVAMMIFMISASLFMIIH-MWAILV
VirB3_Bhe       --------------MNEDPLFLACTRPAMFAGVTMEAMAFNVMATSILFILTSGFTMIGL
LvhB3_Lpn       -----------MSDLEISPIFNALTRPAMTAGVTFEYHMLNLIVSMCAFIGFS-PLYGLI
TrbD_PM3        -------MAEYDDLEEGEVLVLAMARPSMVGPFTLSSILISLIAPVLLALLIRSLYPLGL
                                   .     .                                  

VirB3_Atu1      LAPLWFGARLIVERDYNAASVVLLFLRTAGRSIDSAVWGGATVSPNPIRVPPRGRGMV--
VirB3_Atu2      LVPLWFGARLVVERDYNAASLVLLFLQTAGRSVDGLIWGGATLSPNPIKVPARGRGMA--
VirB3_Bsu       IVPIVLVMRQITQTDDQMFRLLGLKAQFRLIHFNRTGRFWRASAYSPIAFTKRKRES---
VirB3_Bab       IVPIVLVMRQITQTDDQMFRLLGLKAQFRLIHFNRTGRFWRASAYSPIAFTKRKRES---
PtlD_Bpe        FPVALLAMRIMIRRDDQQFRLIWLYLRMRWLSRDRTHAFWQSTVYAPLRYAERRRRLRKP
TrbD_Atu1       GIAIWLIVVGALR---TMAKADPLMRRVYIRHISYKNFYRATSSPWRKF-----------
TrbD_Atu2       GVAIWLVAVAALR---MMAKSDPLMRRVYLRHVSYRSHYRPTSTPWRKF-----------
TrbD_Rsp        GVVVWIVIVGLLR---MMAKSDPLMRQVYVRHISYKPYYKATTSPWRRY-----------
TrbD_Eae        GIALWFGALFALR---LMAKADPKLRHVYLRHRRYKPYYPARSTPFRDNTPSQGKQYK--
TraL_Eco        AVLVYFGIKKLKK---GRGSS-WLRDLIYWYMPTALLRGIFS------------------
TraL_Sty2       AVLVYFGIRKLKK---GRGSS-WLRDLIYWYMPTALLRGIFHNVPDSCFRQWIK------
TraL_Sty1       AAVIWQLIRAAKC---GKSSR-WLYNWCYWYLPTELFRVVYRVIPDSSFRKWIK------
TrwM_Eco        VPPLWFIMAQITKNDDKAFRIWWLWIDTKFR--NRNKGFWGASSYSPANYRKRR------
TraA_Eco        FVFLRIPSAALTKYDDRMFRIMGLWLKTNSVIGLILRLSSGEDRLIPLLTTNVRV-----
VirB3_Bhe       GIGLHFVLREITKHDHNQFRVLFAWLNTRGKQKNLNRWGGGSTSPLRLIRTYEELNR---
LvhB3_Lpn       FIPLHVFGWLVCR-YDTHFFTICAKRFLLPEAPNTSLWRVRAYEPF--------------
TrbD_PM3        IPVLFVISYWICSKDVYLFGVLQAASNLKAS-RLRKLWGYRSYAPR--------------
                                                                            
Other Results